A Generalized Suffix Tree, based on Ukkonen's paper "On-line construction of suffix trees" http://www.cs.helsinki.fi/u/ukkonen/SuffixT1withFigs.pdf Allows for fast ...
Abstract: Conventional cross-correlation is commonly used in the estimation of the spectral shift for optical frequency-domain reflectometry (OFDR) based distributed sensing. However, the potential ...
Abstract: The Longest Common Substring of two strings is a character sequence that appears in both texts and is the longest of these. The method is widely used in several text similarity measurement ...
Sequence tag index in the field of computational proteomics can be used to facilitate faster open-search-based identification of modified peptides and in-depth analysis of mass spectrometry data. In ...
In the field of genome assembly, contig assembly is one of the most important parts. Contig assembly requires the processing of overlapping regions of a large number of DNA sequences and this ...
When the long reads generated using single-molecule se-quencing (SMS) technology were made available, most researchers were skeptical about the ability of existing algorithms to generate high-quality ...
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